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ytlP [2019-01-14 09:23:00]
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ytlP [2019-01-14 09:23:00]

putative 2-5 RNA-ligase
Locus
BSU29960
Isoelectric point
8.50
Molecular weight
21.00 kDa
Protein length
183 aa Sequence Blast
Gene length
549 bp Sequence Blast
Function
RNA metabolism
Product
putative 2-5 RNA-ligase
Essential
no
Synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
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Categories containing this gene/protein

  • Metabolism → Nucleotide metabolism → Nucleotide metabolism/ other
  • Groups of genes → Poorly characterized/ putative enzymes

    • Gene

    Coordinates
    3,065,751 → 3,066,302

    The protein

    Protein family

  • UPF0097 family (according to Swiss-Prot)

    • Paralogous protein(s)

  • YjcG

    • Structure

  • 1IUH (from Thermus thermophilus, 24% identity)

    • Expression and Regulation

    Operons

    Genes
    ytlP-ytlQ-ytlR-amyX
    Description
    PubMed

    Sigma factors

  • SigD: sigma factor, PubMed, in SigD regulon
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    Biological materials

    Mutant

  • MGNA-A431 (ytlP::erm), available at the NBRP B. subtilis, Japan
  • BKE29960 (ΔytlP::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATCCGTCTGACACTCCCTT, downstream forward: _UP4_TAATTCATTGCGGAGTGGAG
  • BKK29960 (ΔytlP::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATCCGTCTGACACTCCCTT, downstream forward: _UP4_TAATTCATTGCGGAGTGGAG

    • References

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